李保珠, 赵孝亮, 彭雷. 植物叶绿体发育及调控研究进展[J]. 植物学报, 2014, 49(3): 337-345.
|
程慧, 葛春峰, 张红, 等. 果树叶绿体基因组测序及系统发育研究进展[J]. 核农学报, 2018, 32(1): 58-69.
|
杨亚蒙, 焦健, 樊秀彩, 等. 桑叶葡萄叶绿体基因组及其特征分析[J]. 园艺学报, 2019, 46(4): 635-648. doi: 10.16420/j.issn.0513-353x.2018-0596
|
宋芸, 贾孟君, 曹亚萍, 等. 连翘叶绿体基因组特征分析[J]. 园艺学报, 2022, 49(1): 187-199. doi: 10.16420/j.issn.0513-353x.2020-0781
|
王璐璐, 黄雨, 傅玉凡, 等. 甘薯淀粉相关性状变异性的分析[J]. 西南大学学报(自然科学版), 2022, 44(2): 39-47. doi: 10.13718/j.cnki.xdzk.2022.02.005
|
李静, 傅玉凡, 黄雨, 等. 10个叶菜型甘薯品种茎尖性状的分析与评价[J]. 西南大学学报(自然科学版), 2022, 44(4): 45-53. doi: 10.13718/j.cnki.xdzk.2022.04.006
|
胡颖, 王茜, 张新新, 等. 叶绿体DNA标记在谱系地理学中的应用研究进展[J]. 生物多样性, 2019, 27(2): 219-234.
|
PAHLICH E, GERLITZ C. A Rapid DNA Isolation Procedure for Small Quantities of Fresh Leaf Tissue [J]. Phytochemistry, 1980, 19: 11-13. doi: 10.1016/0031-9422(80)85004-7
|
CHEN S F, ZHOU Y Q, CHEN Y R, et al. Fastp: an Ultra-fast All-in-one FASTQ Preprocessor [J]. Bioinformatics, 2018, 34(17): i884-i890. doi: 10.1093/bioinformatics/bty560
|
LI H. Minimap2: Pairwise Alignment for Nucleotide Sequences [J]. Bioinformatics, 2018, 34(18): 3094-3100.
|
LANGMEAD B, SALZBERG S L. Fast Gapped-read Alignment with Bowtie 2 [J]. Nature Methods, 2012, 9(4): 357-359.
|
WICK R R, JUDD L M, GORRIE C L, et al. Unicycler: Resolving Bacterial Genome Assemblies from Short and Long Sequencing Reads [J]. PLoS Computational Biology, 2017, 13(6): e1005595.
|
TILLICH M, LEHWARK P, PELLIZZER T, et al. GeSeq-versatile and Accurate Annotation of Organelle Genomes [J]. Nucleic Acids Research, 2017, 45(W1): W6-W11.
|
LOWE T M, EDDY S R. TRNAscan-SE: a Program for Improved Detection of Transfer RNA Genes in Genomic Sequence [J]. Nucleic Acids Research, 1997, 25(5): 955-964.
|
LOHSE M, DRECHSEL O, BOCK R. Organellar Genome DRAW (OGDRAW): a Tool for the Easy Generation of High-quality Custom Graphical Maps of Plastid and Mitochondrial Genomes [J]. Current Genetics, 2007, 52(5): 267-274.
|
SHARP P M, LI W H. Codon Usage in Regulatory Genes in Escherichia coli does not Reflect Selection for 'Rare' Codons [J]. Nucleic Acids Research, 1986, 14(19): 7737-7749.
|
BEIER S, THIEL T, MVNCH T, et al. MISA-web: a Web Server for Microsatellite Prediction [J]. Bioinformatics, 2017, 33(16): 2583-2585.
|
BENSON G. Tandem Repeats Finder: a Program to Analyze DNA Sequences [J]. Nucleic Acids Research, 1999, 27(2): 573-580.
|
RICE P, LONGDEN I, BLEASBY A. EMBOSS: The European Molecular Biology Open Software Suite [J]. Trends in Genetics: TIG, 2000, 16(6): 276-277.
|
KATOH K, STANDLEY D M. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability [J]. Molecular Biology and Evolution, 2013, 30(4): 772-780.
|
PRICE M N, DEHAL P S, ARKIN A P. Fast Tree 2-approximately Maximum-likelihood Trees for Large Alignments [J]. PLoS One, 2010, 5(3): e9490.
|
李玉梅, 李书娴, 李向上, 等. 第三代测序技术在转录组学研究中的应用[J]. 生命科学仪器, 2018, 16(S1): 114-121, 113.
|
战斌慧, 周雪平. 高通量测序技术在植物及昆虫病毒检测中的应用[J]. 植物保护, 2018, 44(5): 120-126, 167.
|
SRISUWAN S, SIHACHAKR D, SILJAK-YAKOVLEV S. The Origin and Evolution of Sweet Potato (Ipomoea batatas Lam. ) and Its Wild Relatives through the Cytogenetic Approaches [J]. Plant Science, 2006, 171(3): 424-433.
|
GONZALES A M, FANG Z, DURBIN M L, et al. Nucleotide Sequence Diversity of Floral Pigment Genes in Mexican Populations of Ipomoea purpurea (Morning Glory) Accord with a Neutral Model of Evolution [J]. Journal of Heredity, 2012, 103(6): 863-872.
|
YAN L, LAI X J, LI X D, et al. Analyses of the Complete Genome and Gene Expression of Chloroplast of Sweet Potato (Ipomoea batata) [J]. PLoS One, 2015, 10(4): e0124083.
|
ZOU H D, ZHANG X J, CHEN J Y, et al. Complete Chloroplast Genome of a Novel Chlorophyll-deficient Mutant (clm) in Sweetpotato (Ipomoea batatas L. ) [J]. Mitochondrial DNA Part B, 2021, 6(3): 968-969.
|
LI F W, KUO L Y, ROTHFELS C J, et al. rbcL and matK Earn Two Thumbs up as the Core dna Barcode for Ferns [J]. PLoS One, 2011, 6(10): e26597.
|